Biology & bioinformatics are evolving with AI, employing novel techniques for tasks like protein structure prediction and genomic analysis.

A recent EMBO | EMBL conference allowed researchers to share their rapidly evolving experiences.

embl.org/news/science-t…

Excited that SpatialData is out Nature Methods! With Oliver Stegle & Josh Moore labs, we introduce & implement a dataframework & fileformat for multimodal spatial omics, based on the openmicroscopy standard. Read at
nature.com/articles/s4159… & try here spatialdata.scverse.org.

Attention organelle enthusiasts!!
I am beyond thrilled to introduce Nellie: a fully automated pipeline for organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy.

paper: arxiv.org/abs/2403.13214
github: github.com/aelefebv/nellie

🧵1/N

Really well-written, intriguing, and not overly hyped perspective on the promises and needs for AI in Biology. Emphasis on high-throughput, low-cost “black-box” data modalities. Fully agree and believe imaging in different ways will be key to generate such black-box data.

Why are some non-antibiotic drugs toxic to bacteria 💊☠️🦠? Do they work like standard #antibiotics (ABX)? Our latest work by Mariana Noto published Science Magazine addresses this fundamental question (1/n)
science.org/doi/10.1126/sc…

My department at KTH Royal Institute of Technology SciLifeLab is recruiting an Assistant Professor in computational biology! Fantastic academic environment, top notch infra, colleagues and students, international vibe, Sweden is a lovely place to live. More info 👇
kth.se/lediga-jobb/68…