We discovered immune signatures associated with heart attack time course, outcome or chronic coronary syndrome. Read more: helmholtz-munich.de/en/newsroom/ne… or the article rdcu.be/dIyei

Led by Ritabrata, happy to present our recent work on single-cell data integration. scDecorr - Feature decorrelation representation learning with domain adaptation biorxiv.org/content/10.110…

We will be looking for new group leaders, with focus on (AI) methods, and especially young scientists. We evaluate by potential not just your current track record - great place to start a lab (speaking from experience!) - contact if interested, & please RT

Our team is expanding, we are looking for a new collaborator - Computational Scientist (IR) - to join us at Institut Curie CNRS Biologie GeneticsDynamics_InstitutCurie . Exciting single cell cancer datasets to analyse and a great opportunity for a permanent position. Postdoc, PhD or IR apply

You have perturbed TFs (for example disease vs healthy) and genome-wide H3K27ac data, what TF activity tools would infer the perturbed TFs that are more likely to be validated?

According to our results, the top 3 tools: RcisTarget, MEIRLOP and monaLisa

biorxiv.org/content/10.110…

AI in Life Science - Professorship RWTH Aachen

PI opportunity (Assistant Prof. Level with Tenure Track) on AI for Life Sciences as part of RWTH Initiative in Computational Life Sciences. Center for Computational Life Sciences rwth-aachen.de/global/show_do…

Inspired by Lior Pachter and team's exploration of scRNA-seq pipelines, we face similar challenges in scATAC-seq, only magnified! After 5 years of tackling these inconsistencies with my advisor Junhyong Kim , Here is a summary (and some solutions😃) 1/n #Genomics #Bioinformatics

Simultaneous single-cell three-dimensional genome and gene expression profiling uncovers dynamic enhancer connectivity underlying olfactory receptor choice ⁦Longzhi Tan⁩ nature.com/articles/s4159…

Biologists concerned about the usefulness of UMAP/T-SNE-type methods for dimensionality reduction need to read this article from Jan Lause, Philipp Berens, & Dmitry Kobak patiently what metrics they're good at. biorxiv.org/content/10.110…;

🔥 Detecting disease trajectories w/PILOT. Cover art by SciStories LLC featured in Mol Syst Biol. Great working w/ Ivan Costa to help tell the science story. buff.ly/499VhCp #ScientificIllustration

Finally out a new paper from the lab lead by Remi Trimbour 'Molecular mechanisms reconstruction from single-cell multi-omics data with HuMMuS'
doi.org/10.1093/bioinf…
#singlecell #multilayernetworks

We used the new computational tool PRINT (doi.org/10.1101/2023.0…) developed by our lab to investigate transcription factor binding during exhaustion progression and iberdomide treatment. We find that iberdomide prevents IKAROS-mediated loss of chromatin accessibility and

#Weltfrauentag Teil 1: Wir stellen euch heute ein paar starke #Frauen aus der #RWTH -Forschung vor 👍:

📸 1: Prof. Laura De Laporte De Laporte Research Group
📸 2: Prof. Sandra Korte-Kerzel Prof Sandra Korte-Kerzel
📸 3: Prof. Ferdinanda Ponci

➡️Infos in den Kommentaren 😀

(c) Peter Winandy

Happy to announce tRigon (toolbox for integrative (path-)omics analysis)!🛠️ tRigon is an user-friendly R Shiny app enabling exploratory analysis of high-dimensional data including pathomics datasets. Check out the publication here: tinyurl.com/mrjtukzt LaBooratory Roman Bülow

Are you particularly creative in 2024 📷🔬🩻🖌️✏️?
👉 Submit your best kidney art here academic.oup.com/ndt/pages/call…
The most beautiful pictures are also exhibited in the NDT Kidney Art Gallery 🖼️🖼️🖼️era-online.org/ndt-kidney-art…
NDT Hans-Joachim Anders ERA - European Renal Association #kidneyart

I am delighted to present our latest Zoo member SCORPION, a gene regulatory network reconstruction algorithm for single-cell data, published in Nature Computational Science : nature.com/articles/s4358… 🙂
SCORPION's development was led by former group member Daniel Osorio

Posdoc Oportunity in Odense Denmark on the use of DBScan derived algorithms for single cell genomics data. …sd-saasfaprod1.fa.ocs.oraclecloud.com/hcmUI/Candidat…

Dr Charlotte Houldcroft is on maternity leave Justin Blumenstiel. Black Lives Matter. Dr Anna Young 💙 This one almost as good frontiersin.org/files/Articles…

Interested to support a young and international team of virologists fight tropical viruses? Like to live in a vibrant European city in Germany? Join our group in Hamburg, we are looking for an enthusiastic Technical Assistant! more infos at: leibniz-liv.de/fileadmin/medi…