Accurate Host–Guest Binding Free Energies Using the AMOEBA Polarizable Force Field #MolecularDynamics
pubs.acs.org/doi/10.1021/ac…
Moses Chung
Vol63 Issue9 #JCIM #compchem
Does a Machine-Learned Potential Perform Better Than an Optimally Tuned Traditional Force Field? A Case Study on #Fluorohydrins #MachineLearning #NeuralNetworks #compchem
pubs.acs.org/doi/10.1021/ac…
Vol63 Issue9 #JCIM #PharmaceuticalModeling
Check out our latest benchmarking work to identify 'optimal' U corrections for the 'r2SCAN' functional on JCTC. We find r2SCAN(+U) to be qualitatively similar to SCAN(+U) and marginally faster. JCIM & JCTC Journals Materials Engineering IISc IISc Bangalore
pubs.acs.org/doi/10.1021/ac…
Scaffold Hopping and Optimization of Small Molecule Soluble Adenyl Cyclase Inhibitors Led by Free Energy Perturbation #drugdesign #drugdiscovery
pubs.acs.org/doi/10.1021/ac…
Vol63 Issue9 #JCIM #PharmaceuticalModeling
Happy to share our view on transfer- and active learning as strategies for reaction development in a low-data regime in JCIM & JCTC Journals !
pubs.acs.org/doi/10.1021/ac…
Robert Wexler JCIM & JCTC Journals Materials Engineering IISc IISc Bangalore Same as SCAN, if I am not wrong.
Atomistic Picture of Opening–Closing Dynamics of DNA Holliday Junction Obtained by #MolecularSimulations #MolecularDynamics
pubs.acs.org/doi/10.1021/ac…
Zhengyue Zhang
Follows you Giovanni Bussi bussilab Petr Šulc
Vol63 Issue9 #JCIM #compchem
Illuminating the Chemical Space of Untargeted Proteins #cheminformatics #drugdiscovery
pubs.acs.org/doi/10.1021/ac…
cote falaguera Jordi Mestres
Vol63 Issue9 #JCIM #Chemical_Information
The Effects of N-Linked Glycosylation on SLC6 Transporters #MolecularDynamics #MolecularSimulations
pubs.acs.org/doi/10.1021/ac…
Matthew C. Chan Diwakar Shukla Shukla Group
Vol63 Issue9 #JCIM #compchem
Here, we introduce a new computational method to access allosteric pockets in integrins! Fresh from press JCIM & JCTC Journals Great collaboration with Allocyte Phramaceuticals and Uni Zurich pubs.acs.org/doi/10.1021/ac… caflischgroup UZH Science Van 't Hoff Institute for Molecular Sciences UvA UvA Faculty of Science
#HighlightOfTheWeek Identification of new prospective allosteric sites in Bak, a pro-apoptotic protein member of the Bcl-2 family.
#compchem #drugdesign
pubs.acs.org/doi/10.1021/ac…
Sai G Gopalakrishnan JCIM & JCTC Journals Materials Engineering IISc IISc Bangalore Nice work, Sai G Gopalakrishnan ! Did you use the same or different electronic minimizers for SCAN and r2SCAN?
Unbinding Kinetics of Muscarinic M3 Receptor Antagonists Explained by #Metadynamics Simulations #MolecularDynamics #drugdesign
pubs.acs.org/doi/10.1021/ac…
Francesca Galvani Laura Scalvini Alessio Lodola Andrea Rizzi
Vol63 Issue9 #JCIM #PharmaceuticalModeling
MF-PCBA: Multifidelity High-Throughput Screening Benchmarks for #DrugDiscovery and #MachineLearning #cheminformatics
pubs.acs.org/doi/10.1021/ac…
david buterez Steven John Kiddle Pietro Lio'
Vol63 Issue9 #JCIM #MachineLearning #DeepLearning
Enhancing Molecular Representations Via Graph Transformation Layers #cheminformatics #compchem
pubs.acs.org/doi/10.1021/ac…
Vol63 Issue9 #JCIM #MachineLearning #DeepLearning